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# CITATION file created with {cffr} R package
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cff-version: 1.2.0
message: 'To cite package "DEHOGT" in publications use:'
type: software
license: GPL-3.0-only
title: 'DEHOGT: Differentially Expressed Heterogeneous Overdispersion Gene Test for
  Count Data'
version: 0.99.0
doi: 10.32614/CRAN.package.DEHOGT
abstract: Implements a generalized linear model approach for detecting differentially
  expressed genes across treatment groups in count data. The package supports both
  quasi-Poisson and negative binomial models to handle overdispersion, ensuring robust
  identification of differential expression. It allows for the inclusion of treatment
  effects and gene-wise covariates, as well as normalization factors for accurate
  scaling across samples. Additionally, it incorporates statistical significance testing
  with options for p-value adjustment and log2 fold range thresholds, making it suitable
  for RNA-seq analysis.
authors:
- family-names: Xu
  given-names: Qi
  email: qixu@andrew.cmu.edu
- family-names: Shen
  given-names: Arlina
  email: ahshen24@berkeley.edu
  orcid: https://orcid.org/0009-0008-5330-6659
repository: https://ahshen26.r-universe.dev
repository-code: https://github.com/ahshen26/DEHOGT
commit: ad614f6a1c47d52b62da98e156d4ce3c4509631f
url: https://github.com/ahshen26/DEHOGT
contact:
- family-names: Shen
  given-names: Arlina
  email: ahshen24@berkeley.edu
  orcid: https://orcid.org/0009-0008-5330-6659